44689.DDBDRAFT_0218574_from_11_to_111QYFLTN--SNIQ--LND----NWLKDCLDHINKNSNNNNNNINLQIISEKVYKYFLNSDI CONSENSUS/80% .p.l.t...th...l......thlpthhp.htt...............p.hhtthL.tDl CONSENSUS/65% hphLpp..pshh..lpt....phlpthlp.hppt...........thsptlhpphLssDl CONSENSUS/50% tphLps..puhp..lss....-WLcsslstlppp.s.....hs.tthscplhcphLsoDL 44689.DDBDRAFT_0218574_from_11_to_111LK---SSLPSFTEQQAKSIND---ITIKVSKF----NDVFILQLNSIKNISESFENRDN CONSENSUS/80% pp...ht....hlst...h.t......t...l.....s.hhlQl.phhslutshhpp.p CONSENSUS/65% cp...huts..sLPs..sltp......pptpl....pGshlLQlpplhslutshhpphp CONSENSUS/50% +-...huss..sLPs..slss.....tppspL....sGshVLQlsclpDISsPthsphp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |