5141.NCU03727.1_from_541_to_1033PASIIEAGELFSTRTRMTRATRQLWEERERFLKFERGWEGVDE---------------DL CONSENSUS/80% P.sl.Eu.plhppphhhshu.hQhhpEcph............................pt CONSENSUS/65% PhuIhEAsclhpp+hhhohu.hQlhcEc-hh...........................cs CONSENSUS/50% PtuIpEAsclLps+lYholup+QlWcEREtFhp.-RGa....................cs 5141.NCU03727.1_from_541_to_1033IDELDLSELTL--------EEKEELGLLKESDKKKDKLGHEIDLGPRPVDDDIKHRLEAV CONSENSUS/80% ..t.t.t.................................................hp.h CONSENSUS/65% .hs.shpp..............................................hthpts CONSENSUS/50% shspshc-hsh.................................tp...ppc.hppLssl 5141.NCU03727.1_from_541_to_1033EEFYKEALPHLQSLVIVLLKAI--VAIASSLVQPQPGQQN----------------PGAP CONSENSUS/80% E.hYpthLsph.phhhshlphh...tt.ss....t.t.s..................... CONSENSUS/65% EphYpthLspLpphhhsLL+hl..lsssss.tttptshs..st...............t. CONSENSUS/50% EsaYpssLPsLsoalIVLLKll..LussssspspspslNshus...........shstth 5141.NCU03727.1_from_541_to_1033QNNGRVSGGPPQGRGQSNGNNAGNDPPSPSDDNVDEARSREIAAKAVTGIMILLLKWLKL CONSENSUS/80% .............................h..tl-h.Rh+EIh.KuhouhlhllLKahKh CONSENSUS/65% ..t........................tshh.tlDh.Rt+EIhsKulSulLlLLLKaFKl CONSENSUS/50% shssh......................pshp.plDlsRpKEIslKAlSuILLLLLKWFKl 5141.NCU03727.1_from_541_to_1033SHILK--FEYFTQLLLDSNYLPLVLKLFALH----------------------------- CONSENSUS/80% sHlhp..FcahsphLh.sphhslhhchhsp.............................. CONSENSUS/65% sHlhp..FEahoQhLh.uNhlsLlLKhhsp.............................. CONSENSUS/50% SHlLK..FEYhoQlLlDuNalPLlLKaFspt............................. 5141.NCU03727.1_from_541_to_1033-----------------DVQQVVESK-------TDRIEHSFFYFCGSRAGAIPQQGLINP CONSENSUS/80% .................sh.phl.tc.........h..hsF...C.h............. CONSENSUS/65% .................sltphlss+.......sshs.hsF...C.htp........... CONSENSUS/50% .................slsphVsuK.......sclsslsFastCslts.p......... 5141.NCU03727.1_from_541_to_1033TATDFEDVDVSEDEAAPPAIKRNRSPpGaekggppdaSSqFISsQP-------PQqQQQQ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 5141.NCU03727.1_from_541_to_1033SEnsgvpSRPEVDELGYPVNPLPKEPI---TDF-------------------SRRNFFSL CONSENSUS/80% ...........h...sh..s............h...................shR.hhoh CONSENSUS/65% .........splst.sh.sst.........p.a...................saRNhFSs CONSENSUS/50% ........psElsppuhssschsp......ssF...................sWRNhFSs 5141.NCU03727.1_from_541_to_1033INYLRVMQKI-CKHKAHRNLL-----LVHYKSSNILRKSL-KVPQQELRLYTLKLFKNQV CONSENSUS/80% lNhL+lhpKl.s+.+tpRhhh.....Ls.hKsu.lh++hh.pl.p..hph.hLKlhK..s CONSENSUS/65% INhL+lhpKl.sKtKspRhhh.....Ls.aKSuslLK+hL.+l.ps.lphalLKLlKtQs CONSENSUS/50% INLLRILpKl.oKsKspRlhh.....LVpaKSusILK+sL.KlppspLpLYlLKLlKsQl 5141.NCU03727.1_from_541_to_1033PYCGRKWRQ--SNMRVITAIYLHCRPELRDEWLSGSDV-----DAEVEEALPLEQALRSL CONSENSUS/80% .ahG+pW+p..sNMchloslY..h+.cLpDsWhhGpDl.....psc..ph.s.E.sLRs. CONSENSUS/65% .YhGRpWRp..uNMclIouIYhpsRhcLpD-WhhGsDl.....-uch.-h.spEpALRuh CONSENSUS/50% PYpGRKWRp..SNM+lISAIYL+sRhcL+DDWLsGsDl.....DA-spDupspEpALRuL 5141.NCU03727.1_from_541_to_1033THWFNVQRY-----------------------------------------PERMGAEvTA CONSENSUS/80% hphap.p+Y................................................... CONSENSUS/65% lphaN.R+Y..........................................p.htt.tht CONSENSUS/50% lcaaNhRRY..........................................pshtspsht 5141.NCU03727.1_from_541_to_1033AMREERD----------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% .h.pt....................................................... CONSENSUS/50% shpsp..p.................................................... 5141.NCU03727.1_from_541_to_1033------------FFTREL CONSENSUS/80% .............F..t. CONSENSUS/65% .............Fppph CONSENSUS/50% ............hFpcch
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |