214684.CND04490_from_475_to_559EEVYE--GKG-------A-------QWDL--YRAMRSRI--------------------- CONSENSUS/80% ..hFp..ups.......c.......Qh-h..YRhM+t....................... CONSENSUS/65% .plFp..upG.......Dh......Qa-l..YRhMRp.h..................... CONSENSUS/50% PcLFp..GcG.......DY......QFEl..YRhMRcps..................... 214684.CND04490_from_475_to_559------------GDD--WGGFHAITNLMWLRYILQYMLVSKSLRKPRALRSTQVPRLARG CONSENSUS/80% ............ttp..WttatPhTNlhWl.Ylhphh.hp...php.........t.hpt CONSENSUS/65% ............sss..WptapP+TNlhWLpYlhspl.lpth.chpsttt....pphhpp CONSENSUS/50% ............sss..WusFpP+TNVLWLcYLscKL.lcpt.cacsssspst.ccttcc 214684.CND04490_from_475_to_559VKPKPDTV----------RS--EKAWGI----LQ CONSENSUS/80% hpthhp.h.........htp..t.p...htp.hh CONSENSUS/65% Lpphhcpl.......hpapo..shph..ssc.lh CONSENSUS/50% L+shccpl.......hpacS..us-h..ss-sLh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |