5807.cgd1_3670_from_1853_to_1963PEFVLECSNMDEKELRRQARTCFNNSNVKPQLLEIKKLFHP---SNNMTDSDVVASLKVL CONSENSUS/80% p..........tthpt...t.s..cphhpPhpptLcpLpps...tpshsppc.hphh+p. CONSENSUS/65% sssh....ppppphsspp.phC..+chh+Pl+csL+cLpps...ppshscp-hsphh+pp CONSENSUS/50% usstppttsscp-h-spspctC..K-tM+PV++uLK+Lccs...scuLs+cEplspl+cp 5807.cgd1_3670_from_1853_to_1963LPVVGDEINEILKLAT---NEISRNKVHNCLWSYVA-KCTV-------FQPHDIEKIYLS CONSENSUS/80% Lh.lGphIpp.ht......tt.p.pphptpLW.asu..ah........htuppLhphYpp CONSENSUS/65% LhpIGcpIsphlpp.....pspphcphcppLWtalu.pahs.......hsup+LtphYc+ CONSENSUS/50% LlpIG-+IcpsLpphp...cspchcca+p+LWsFVS.pFhs.......lcucKLpclY++ 5807.cgd1_3670_from_1853_to_1963W CONSENSUS/80% h CONSENSUS/65% h CONSENSUS/50% l
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |