Q9ZSB5/1-100 NLKQGNL-YFVISKRWYTSWQEYVE----------------------------------- CONSENSUS/80% ..p.st..hahls.tWhpph.past................................... CONSENSUS/65% s.cpuph.hallsppWappatpast................................... CONSENSUS/50% shccuss.aalIopcWacpWpcalp................................... Q9ZSB5/1-100 -------------NSANECSTGESSEAPRPGPIDNHDIIESDSD--------------IN CONSENSUS/80% .............................PGPIssttlhtsp.................. CONSENSUS/65% ........................tps..PGPIcNpslhsscs................. CONSENSUS/50% .......................sspsp.PGPIDNsslhsscs................. Q9ZSB5/1-100 DPQLRRLLVEGEDYVLVPKQVWKRLVEWYSGGP----PIERKLICQG CONSENSUS/80% ...hp..h..t.shh.lst.hWphL.phasht......l.cp.lt.. CONSENSUS/65% t.ph+.tLhps.DYshlsptlWphLhphYGsss.....l.Rpslpps CONSENSUS/50% s.pl+ppLh-upDYsllPpplWctLhcWYGsGP...pslhRcllsps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |