Q9W639_spt/1-1 ESETFAKRAIESLVKKLKEK---KDELDSLITAITTNGAHPS------------------ CONSENSUS/80% .ttt.hcthhtsLhKclccp.....plctL.pAl.spst..................... CONSENSUS/65% tppphhc+sscuLlK+LKc+.....pL-sLhpAlpopGssst.................. CONSENSUS/50% p-E+as+KAlcuLlKKLKc+....tsLEsLlcAVpS+Gssss.................. Q9W639_spt/1-1 KCVTIQ-------------RTLDGRLQVA------------GRKGFPHVIYARLWRWPDL CONSENSUS/80% tClhhs...............h.t+ht...............phh..pllhs+laRWs-l CONSENSUS/65% tClhls..............phDuRLth.............t+ps.PHllhs+laRWPDL CONSENSUS/50% cCVslP.............+oLDGRLQss............tRKuhPHVlYCRLWRWPDL Q9W639_spt/1-1 H----KNELKHVKYCQYAFDLKC-----------------------DSVCVNPYHYERVV CONSENSUS/80% p.....pcl+.l..Cp..h..tp.........................lChNPYHaphl. CONSENSUS/65% pp...tpEL+tlspCphsht.ppp.......................plChNPYHYpRlp CONSENSUS/50% ps...psELKsLssCcauaps+ss.......................pVClNPYHYpRls Q9W639_spt/1-1 SPG CONSENSUS/80% t.. CONSENSUS/65% ps. CONSENSUS/50% sPp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |