MAD_DROME/1-18 AFWASIAYYELNCRVGEVFHCNNN---SVIVDGFTNPS---NNSDRCCLGQLSNV--NRN CONSENSUS/80% t.WsplhYaEhppplGchhth.s......hlshhhs......ptsphsLs.hsss...Rs CONSENSUS/65% phWsplsYaEhssRVG-tapsps.....hslDGahcs....spss+hsLGthsNs..pRs CONSENSUS/50% caWCoIuYYEhsoRVGEsF+lsus...sloVDGaoDs....ssusRaCLGpLoNs..sRs MAD_DROME/1-18 STIENTRRHIGKGVHLYYVT--GEVYAECLSDSAIFVQSRNCNY----HHGFHP-STVCK CONSENSUS/80% ttht.hR.pIG.Glpl.h....splah.shus.slFVpS..hs.......sh....hlh+ CONSENSUS/65% ttsppsRt+IGpGlpLphcs..GsVahpshucpslFVpSsshs......tuht...tVpK CONSENSUS/50% sslccsRp+IGcGVpLshcs..G-VWlpspSDssIFVQSssLst....psGpsh.ssVpK MAD_DROME/1-18 IPPGCS---------LKIFNNQEFAQ---------------------------------- CONSENSUS/80% l.sths.........h+lFshp..t................................... CONSENSUS/65% l.Psts.........lKlF-hcphtp.................................. CONSENSUS/50% lsPuso.........lKVFDhccFpp.................................. MAD_DROME/1-18 LLSQSVNNGFEAVYELTK-MCTIRMSFVKGWGAEYH-RQDVTSTPCWIEIHLH CONSENSUS/80% ......tp.h.ss.p.......lphSFsKGaG.pY..R..lhpsPCWlElhlp CONSENSUS/65% ....pstcshpsshchpp.hsslRlSFsKGWGtsYp.RpslpssPCWlElpLs CONSENSUS/50% hhtpssscsscust-Lp+.hCslRlSFVKGWGs-Ys.RQslouTPCWIEl+LN
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |