5270.UM00321.1_from_6_to_79VYYKFKSQK--EPSRITFDGT-GISVWDLKREIILQNKMGRGTD-------FDLGVYNSD CONSENSUS/80% laY+FpSth..p.ppl.hsG..hlol.-LKctIhtppphtps.s.......hpL.l.ssp CONSENSUS/65% laYKF+Sph..shsplsFDGh.tIoVh-LK+tIhppp+Lucsps.......h-Ltlhsup CONSENSUS/50% VaYKF+Sp+..-asslsFDGs.sISVsDLK+cIhppc+LG+usD.......FDLpIpNAp 5270.UM00321.1_from_6_to_79TND------------EYKDDNFLVPRSTQVIVRRLP CONSENSUS/80% otc............cYtD-s.hls+sopllhcRhP CONSENSUS/65% TtE............EYpD-stlIP+sooVll+RlP CONSENSUS/50% TsE............EYsDDsslIP+NoSVIVRRlP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |