297245.lpl0258_from_229_to_591EYRY-CTEAVLKSA-----------SIDKNKLLHFLKEQGE-CASVTGNDR--------- CONSENSUS/80% thsY.Cophhltht...........thp.pthcp.ltthG-.Slllhsspt......... CONSENSUS/65% paGY.CTEhhlphs..........tshshpph+ptLsphGD.SllVls--p......... CONSENSUS/50% caGY.CTEallcts..........psh-h-cFRscLuplGD.SLlVVuD--......... 297245.lpl0258_from_229_to_591ITRFHVHTNNPREIFTSLYKDYTIQYPKVDDMQRQHELQFGKKYKIGLVTDSSADLPQD- CONSENSUS/80% hh+VHlHsppPGtshp.u.phGpl.pl+l-sMp.Qtpt.htttt................ CONSENSUS/65% llKVHlHopcPGtVlphu.paGplhclKl-NMptQppphhptptt............... CONSENSUS/50% lVKVHVHT-cPGpVlstuhcaGcLt+lKI-NM+pQHcsllppppppst.tt......... 297245.lpl0258_from_229_to_591----------LIDEY--QIHQIPLNIHVDEHHLLDKYCFEANYFYTQLNSFRTYPK---- CONSENSUS/80% ............t.h....uhlsls.GtG..........htclh.pshGss.llts.... CONSENSUS/65% ...........tpph....ulluVssGpG..........lsclF.cshGsshllpG.... CONSENSUS/50% ..........pp+ch....ullAVusGcG..........lu-lF.+ulGlstVIpG.... 297245.lpl0258_from_229_to_591-------TSCMNPN------LIEEKLAKIASHYNH------VLVLSI---SSK---MSGT CONSENSUS/80% .......spshsPo....stphhpslpthtupp........lhlLPN...sts...hhhu CONSENSUS/65% .......GQThNPS....spDllcAlppssAcp........lhlLPN...NpN...IhhA CONSENSUS/50% .......GQTMNPS....TpDIlcAIcpssAcp........VllLPN...NsN...IlhA 297245.lpl0258_from_229_to_591YDAFLTAT-KKYANITVLDTKTNSGAHGLLLHYAGQLIASGNDIDTITKLLGKAIKNTYI CONSENSUS/80% Appusph....ph.lhll.opohspGhsAhh.as.ptphpps.httMtpshtt....... CONSENSUS/65% AppAuphs...chslhllso+olsQGlsAlhsassptsh-cN.httMpculps....... CONSENSUS/50% AcQAAcls...-psVtVlPT+TlsQGluALlsFsPcpslE-N.tpsMs-Alss....... 297245.lpl0258_from_229_to_591FVMVNQFKSMIRSGRVNKISG--RIAQWVNIKPIVSIDSAGQGIMVGKCFSA--SRARNK CONSENSUS/80% .stssplohAs+ss.h...ss..hthppsshhuhhp......tclh.ss.s....tsh.t CONSENSUS/65% .VpouplThAVR-oph...su..hpl+cs-hlGlhc......scIhssspch..hpsstp CONSENSUS/50% .V+oGpVThAVRDTpl...sG..lcI++GDhlGll-......G+IlssupDh..hssspc 297245.lpl0258_from_229_to_591LINFLQEKKDEAQLILEDYCIIHAG------DKNQALHLAEMTTQAFNKPPTYIESVSLT CONSENSUS/80% hlpthlsp..tsEllolhhGtsss........tt.sptl.thlttta...tl-hphh.Gt CONSENSUS/65% hlcphlsc..cuEllTlhhGp-ss........pppsppltphlpppa...cl-l-hapGs CONSENSUS/50% llc+Mlc-..-oEllTlhaGcDus........pccAccLtctlccpa..s-lEVElacGu 297245.lpl0258_from_229_to_591IGLH----AGQGCIAI CONSENSUS/80% Q.ha......hhhulE CONSENSUS/65% QPlY......alluVE CONSENSUS/50% QPlY.....salloVE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |