273068.TTE1996_from_32_to_207AIGDADHGINMDRGFEAVKQKLATIPENS------------------------------- CONSENSUS/80% .hsDGDpG.shthshpshhtthtt.................................... CONSENSUS/65% slGDGDpGtNMstuhpushptlpsht.t................................ CONSENSUS/50% slGDGDsGsNMspGhpultcplcstssp................................ 273068.TTE1996_from_32_to_207---DIGTILKTVGMTLVSTVGGASGPLYGTAFMRAGQAVQGKTELTEEDVVK-------- CONSENSUS/80% ...s.sthhtthu.hhh.thtGsSGslhu.hhhthupthttttt.s.............. CONSENSUS/65% ...shsplhpslutshhtsssGsSGslhuphhhuhupsltsppphsstthh......... CONSENSUS/50% ...slusllcslupullsusGGsSGsLauphFpuhuculpscsslsssshst........ 273068.TTE1996_from_32_to_207IFEAAL-QGIKDRG------KAQAGDKTMIDSIE-----PAYKALKESLENN------IA CONSENSUS/80% hhttuh.pth.ths.......hp.s-tThlssh......shhpth.t............. CONSENSUS/65% ulptuh.cshhpts.......ucss-pThlDslt.....ssscshtpt............ CONSENSUS/50% ALpuul.-ulhctG......tAcPG-+TllDllp.....Pus-uhppsh.........ts 273068.TTE1996_from_32_to_207LPEALKRAVNAAKE----GMEYTKNI-SARKGRASYLGERS-------IGHIDPGATSSY CONSENSUS/80% ..t.httshptutt....uhptT.ph.hshhtcu...............sh.DsGu.uhh CONSENSUS/65% ..pshptsspsApp....uhcpT.sh.hsthGRA..h............GhsDsGuhuhs CONSENSUS/50% hhcshpsAscAAcc....us-sTscl.lAphGRAshlupcu.......hGslDPGApuls 273068.TTE1996_from_32_to_207LMIKALAD CONSENSUS/80% hhhpuhht CONSENSUS/65% hlhpuhhp CONSENSUS/50% hllcultc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |