Q6YQE5 AERALLGVVLLNPEIISLVF--NEITETDFYSPHH-KYIFKAMKTLHQNN--------KE CONSENSUS/80% ..+.hlthhlppPphst.h........t..p..th..hhhthhthhttts.........h CONSENSUS/65% shRthltlLlQpPpLAthl...sh.shpphp.sth.slhhcllphsptps.....sh.ss CONSENSUS/50% shRplIsLLLQpPpLAstls..sttslcshppPuh.sllhcLlctspsss.....sl.so Q6YQE5 IDYVSISA---ILENEKLLKQIGGI--DYLNEL---SDSMPS------------PRHLET CONSENSUS/80% ttlhphhp...tt...thlptls....p....h....pt..t..............h.ps CONSENSUS/65% upllEthc...ssphtphlppLus...s..h.l...pccphp............ppFh-s CONSENSUS/50% upLlEpaR...ssstpplLpcLAsh..-..phl...s--phc............ppFtDs Q6YQE5 YIDLIKETSLKREIGGIVT--KLSQIA--RSKIAP---QEFLELI CONSENSUS/80% h.th.tp..htpphttL.t..+.p......s.t-t...tph.tl. CONSENSUS/65% ltplhpp.hhppclppLhs..+tp.ts..hssp-+...pclhtLh CONSENSUS/50% lspLtcp.hlcccl-pLpu..Ks+ppu..LosEE+...cELtsLh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |