387662.CRP_158_from_469_to_588QVSYKESIKKTII-QEGKYIKQTGGRGQYGHVVLKIEP---------------------- CONSENSUS/80% plshcEsh.t....hthhhhcp.GsptphucshhthtP...................... CONSENSUS/65% pVsYRETlptp.t.hptpah+QoGGpGQauclhlplcP...................... CONSENSUS/50% QVuYRETIppssppsct+apKQoGGcGQaG+VhlclEP...................... 387662.CRP_158_from_469_to_588-------ILI-----------EKD-DFIFKIEVVGGVIPK---EYFLSIEKGILE-QIKC CONSENSUS/80% .......................th.h.sph..t.uhh.h...phh.sl.pGhpp.shpp CONSENSUS/65% ......................tshtF.spl.hG.GslPp...pahsulccGhpp.shpp CONSENSUS/50% .......ht.............pGapFsscl.sG.GslP+...EaIPuV-+Glc-.Ahcs 387662.CRP_158_from_469_to_588GVVL-----GYPVTKIK--ITLINGSFHPV------------DSSEYA-------FKNAA CONSENSUS/80% G.lt.....s..hhslc..hplhcuthHts.............opthu.......h..As CONSENSUS/65% GsLu.....GaPlhsl+..ssLhDGshHsV............DSsphA.......FphAu CONSENSUS/50% GsLA.....GaPllDVK..VsLhDGuaH-V............DSS-hA.......F+lAu 387662.CRP_158_from_469_to_588SIALKEALKKAN CONSENSUS/80% thuhttuh.put CONSENSUS/65% phAh+puhtpAp CONSENSUS/50% ptAh+cAhpcAs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |