YAV1_SCHPO/2-0 PWAISKEEKRIYDQIFDAWDKERKGTLGGNAVLEIFGQ--SKLTRTELEHIWNLCDHGDK CONSENSUS/80% ..hlp.tp..hatphFttht...tshlss.tst.hhhp..otLst..LsplWtLsDhpts CONSENSUS/65% .Whlssp-ptpYpplFpshss.tsGhlsusps+slhhp..StLsps.LupIWsLsDhcps CONSENSUS/50% sWslosp-+sKY-pIFculcstssGploGsps+slahp..SsLPsspLu+IWsLuDhDsc YAV1_SCHPO/2-0 GSLDRD-EFAVALHLIYRKLNG--NEVPAVLPPELIPPSTR CONSENSUS/80% G.lsh..pF.huhhLl..t.tt....lP..lssthhs.s.h CONSENSUS/65% GpLstp.EFslAhaLlttthpG...plPtsLPspllssspt CONSENSUS/50% GpLs+c.EFulAM+LIppplsG..pclPssLPspLlPsopp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |