Q9NGT0_PLAFA/945-1209GGVPHD-MYGMTTLGIETYISKLCE-KLNIKEESISRSLVGGPDGDLGSNAILQS----K CONSENSUS/80% ...........ss.uh...h..hht...t....tthphhlpG..Gplu..hh.hh.t..u CONSENSUS/65% .u........hTuhGhh.hhpthhp.hhs..phpstphhlpGh.GsVG.tssphlhph.G CONSENSUS/50% uutsps....hTuhGlhtslcthhp.chst.-lcGp+lslQGh.GNVGptuAchLtph.G Q9NGT0_PLAFA/945-1209TKIISIIDGSG-----ILYD--KQGLNKEELIRLAKRRNNKDK----------------- CONSENSUS/80% shhl...................pshs..tl.th.......................... CONSENSUS/65% upllsl.DtpG.....slhp..spGlshppltph..hpt..................... CONSENSUS/50% A+llulsDssG.....slhs..ssGlsh-cLpch..h+ps.................... Q9NGT0_PLAFA/945-1209---------------SKAITCCTLYDEKYFSKDGFKISIEDHNVDIF-GNKIRNGLDFRN CONSENSUS/80% .......................................t...........h...h..pt CONSENSUS/65% .....................................ltth.........tsph.hsscp CONSENSUS/50% ...................................ttlpca........ssuch.lss-c Q9NGT0_PLAFA/945-1209TFFLNPLNKCELFNPCGGRPHSINIFNVNNII-KNG---------------ECIYKYIVE CONSENSUS/80% .hth....ts-lhhPs.Ah.t.lsttphttl......................thphlst CONSENSUS/65% hhph....psDlhhPC.Ahts.lstpssppl......................ts+llsE CONSENSUS/50% lasl....csDIhlPC.AtsssIspsslspl......................psKlVuE Q9NGT0_PLAFA/945-1209GANVFISDD-----ARNILESKN----------VILFKDAATNKGGVISSSLEVLAGLV- CONSENSUS/80% uAN..hs.t.....s..hhtppt..........lhhhPshhhNsGGlhss.hph.t.... CONSENSUS/65% GANhshosp.....Atphhpp+s..........lhhhPDhhsNAGGVhsuuhEh.tt... CONSENSUS/50% GANsPsTsc.....AsclLcc+G..........lllsPDhluNAGGVssSuhEhspshth Q9NGT0_PLAFA/945-1209------------------------------------------------------LDDKQY CONSENSUS/80% ......................................................ptpth. CONSENSUS/65% ......................................................sp-ph. CONSENSUS/50% ......................................................ss-clt Q9NGT0_PLAFA/945-1209IDYMCSPDSDILQVDENEINFVH-------QNQKMNHSLSFKRG-------- CONSENSUS/80% tth.t.htt.htphht.t.p.t............hu..hs.tplh....... CONSENSUS/65% pphpphhppshpphhppupptth.......shtpsA..huhpplht...... CONSENSUS/50% sclpcphcsshsplhcpupccsh.......shppuAsplAhc+ltpshp.ps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |