58|O26858/1-14 LSQRTRDENTDE-ATASL--FERYP--------------------SIEDVAYAPL----- CONSENSUS/80% h.tpspsths.t.hh.ph..htth..... .............p.pshhths.... . CONSENSUS/65% lsppspspsstp.hhtpl..hpphs.... .............shpslhphs.... . CONSENSUS/50% LSQQToscsVsp.htpcL..hccas.... .............oscsltsssp... . 58|O26858/1-14 -EEIEALIRK--AGFYHVKARRVR---------EVS-RIILE----EYDGKVP------- CONSENSUS/80% ..ph.phht....hhh.t+sp.lh.........ths.thl.p.....htsth........ CONSENSUS/65% .tcl.phlcs..hshapp+uchlh.........phu.phlhc....phsuphP....... CONSENSUS/50% .p-lpcll+s..hGhappKA+pLp.........psu.chls-....casGclP....... 58|O26858/1-14 -------------DDINELLK-LPGVGRKTANCVLVYAFGR---PAIPVDT---HVHR-I CONSENSUS/80% ..... .....tshttlht.l.GlG.hsAthhh.hsht.....h..lDh...thhR.h CONSENSUS/65% ..... .....pshppLhp.LsGVG.hTAsslLthuhsp...shhsVDs...plhR.l CONSENSUS/50% ..... .....cshc-Lls.LPGVG+KTAsslLshuasc...sshsVDs...aVpR.l 58|O26858/1-14 SNRIGLVD------TRT-PEETERALMKVIPR--EYWIELNDL----MVQFGQD CONSENSUS/80% hp+hh...........t...th.t.h.phh........tht......hh.hst. CONSENSUS/65% hpRhhhht......tps..pplpphhpphhs...t.htphpth....hlhauph CONSENSUS/50% spRlthsp......pps.scclccplcchlPp..pphpclspt....lltaGpp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |