59689.fgenesh2_kg.3__1274__AT3G12140.3_from_1_to_74METQ---IHQL--EQEAYTAVLRAFKAQSD--AISWEKESLITELR-------------- CONSENSUS/80% .tt....l+pl..E.pAYtshlpshtApus...lo.pppthlppLt.............. CONSENSUS/65% hptp...l+pL..EhcAYtullpAhpApus...loh-+cpllscL+.............. CONSENSUS/50% scsp...l+pL..Eh-AYsulLcAF+AQGs...LSWEK-sLLo-LR.............. 59689.fgenesh2_kg.3__1274__AT3G12140.3_from_1_to_74--KELGV-SDDEHREL-----LSRVNKDDTIQRI-----RDWRQGGGS CONSENSUS/80% ....Lpl.opccHh.......lpph.ps...........t....t.tt CONSENSUS/65% ..ppLpI.Ss-cHtt......lppl.scphltpl.....tphh.ssss CONSENSUS/50% ..ppLsI.Ss-EH+tp.....L++lssD-plppl.....pptppusss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |