78245.Xaut_0142_from_22_to_219TNTIMRQGVPTIINPYDLFALEEAMRLRDKFGG-----EVTVLTMGPP--------SAED CONSENSUS/80% hhhh.ptt....h..hs..hlttuhpltt.........plhsl.hG..........t..t CONSENSUS/65% shslscpsstthh.shshtslptAhpltpt........clsslshG..........tstp CONSENSUS/50% shlls-psssplhsssstpAlspAt+Lu-ph.......-VsslslGs.........pssc 78245.Xaut_0142_from_22_to_219SLRKALTYG-ADRAVLLTDRFFAGSDTLATSFALAT---AITKIGETYG-----VPDLVF CONSENSUS/80% ..ttthhhh.sscshhhps..............ht.....h...............phll CONSENSUS/65% shtpshhhu.s-cslhlpstthtt.........hst.htslhpth...........shll CONSENSUS/50% slcsALutG.AD+llllcssshstt...t...hhuphhssltpptt.........h-lll 78245.Xaut_0142_from_22_to_219TGKQ-TIDGDTAQVGPGIAKRLGLMQITYVAKVAEFDPAAR--------------TITLE CONSENSUS/80% hutp....s.stphsshlAthlshs.hs.h.tl.......................hhhp CONSENSUS/65% hutp....stupplustlAshLshs.hotssplph.....................hhsc CONSENSUS/50% sGso....usupsluPclAutLsssploclsclcss...................pstl+ 78245.Xaut_0142_from_22_to_219RRAEGG---TQVLKSK-LPCLVAMLEATN--EIRR---GSMENALRAAR---AEVVKWSA CONSENSUS/80% ..hts....h.........hlhoh..t......t....s...thhts............. CONSENSUS/65% .hhsGt..th.hhp.p.hstllTlh.shh..tsp....sshhphhpsttp.......... CONSENSUS/50% ptauGshhustpss.s.hPsVlTVpsssh.sps+...hsuhsslhpuppc.......ht. 78245.Xaut_0142_from_22_to_219KDAGVQD CONSENSUS/80% ..h..p. CONSENSUS/65% tphhhp. CONSENSUS/50% schsscs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |