DPO3_BACSU/1-1 TYVVFDVETTG-------LSAV---------YDTIIELAAVKVKGGE-----------II CONSENSUS/80% .hhhhDhEhss.......ht............ttlhclshlth.t............... CONSENSUS/65% phlslDsEtoG.......hsst..........spllcluhlphps..............h CONSENSUS/50% shlslDsETTG.......lssp.........tccIlEluuVslcsst...........ht DPO3_BACSU/1-1 DKFEAFANP----HRPLSATIIELTG---ITDDMLQD----APDVV--DVIRDFREWIGD CONSENSUS/80% ..hp.hlps.......ls....phps...lp.t.l.t....t..ht..ts.tphhthhtt CONSENSUS/65% phhpphlpP....tt.lsshspchpG...Ispthlts....t.php..plhpchhphlps CONSENSUS/50% ssacsaV+P....spslsctsscloG...Iosctlss....ssshc..-Vhpcltpalcs DPO3_BACSU/1-1 DI--------LVAHN-ASFDMGFLNVAYKKLLEVEKAKNP--VIDT----------LELG CONSENSUS/80% ..........hlhtp.ht.Dhthlt..h..............hhss..........h.h. CONSENSUS/65% t.........hlstp.hphDhphlphth.t............hhDo..........hpht CONSENSUS/50% ph........llstNsssaDhphLppphtc............llDT..........lpls DPO3_BACSU/1-1 RFLYP------------------EFKNHRLNTLCKKFDIELTQH-------HRAIYDTEA CONSENSUS/80% .hh.........................slp.lstthhh...t........Hpuh.Ds.h CONSENSUS/65% thhh......................p.sLptLspphtht..tt.......HpAltDsth CONSENSUS/50% cthtst...................hphoLcpLsccashpppppt.....tHcAlcDAcs DPO3_BACSU/1-1 TAYLLLKMLKDAAE CONSENSUS/80% hhtlh.hhht.h.. CONSENSUS/65% shplhthhhpphtt CONSENSUS/50% shclapthtpphtp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |