gi|2494287|sp| GCS----TKLGLEGGAIADSQISASSVYMG--FMGLQRWGPELARLYRTGI-------VN CONSENSUS/80% .s......shGh..........hs....................chp............s CONSENSUS/65% tst.....slGh....h....htu..............htsthsRls...........ss CONSENSUS/50% sCs....hslGhts..l.s..lsAsp............hssphuRLst..........ss gi|2494287|sp| AWTASS------------YDSKPWIQVDFLRK-MRVSGVMTQGASR-----AGRAEYLKT CONSENSUS/80% tW......................h.hDh.....hh.hh...hsh............hh. CONSENSUS/65% uWsstt................p.hhlDlt...hplssl..hsut......hsttphhth CONSENSUS/50% uWssspss..............phhtlDLtt..pplsul..toGp......tusschsst gi|2494287|sp| FKVAYSLDGR------------RFEFIQ-------------------DESGT-GDKEFMG CONSENSUS/80% hhh.ht................ta.............. ................hh.t CONSENSUS/65% hhh.aptp..............sWhshh.......... .............tshhahs CONSENSUS/50% thh.Ypsct.............sWsshp.......... .............pstsFsu gi|2494287|sp| NQDNNSLKINMFNPTLEAQYIRLYPV-------SCHRGCTLRFELLGC CONSENSUS/80% s...t..hh..h....hsRalRlhsh...........t.hhch-lhss CONSENSUS/65% N..sstshht.hs.shhARalRlhPt..........tshsh+hElhGC CONSENSUS/50% N.sssssslspFssPhlARYlRlhPss........psssshRlELhGC
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |