Q9NH96/210-307 TVFAPTNEAFAKIPAEKL---------------KEILKNI--------PLLTKILKYHVV CONSENSUS/80% TlhsPpspAhtt......................th................thl.hHhl CONSENSUS/65% TlFsPsspAFpph....................pplhtp............tpllphHll CONSENSUS/50% TlFAPo-cAFsclssthh...............sslpsst..........hpplLpaHll Q9NH96/210-307 S---GTFCSAGLTN----------GATVPTLE---------GSDVTVHISG--------- CONSENSUS/80% ....thh..tth.t.............h.oht.........s..l.ht..t......... CONSENSUS/65% s...thhh.pslhs..........ttthpoht.........stplplptps......... CONSENSUS/50% s...splssssLps..........ssslsTls.........Gsclplssss......... Q9NH96/210-307 --GSVTVNNA---------------VVVFV--DIPVTN-------GVVHVIDTVL-IPK CONSENSUS/80% ....hhhs..................lht...sh..ts.......hhlahlspll.hs. CONSENSUS/65% ..tthhlss................tlhps..sh.sss.......uslahlDplL.hP. CONSENSUS/50% ..sslplNss...............pllps..DlsssN.......GllHsIDcVL.lPh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |