5911.XP_001020270_from_279_to_458NVYEKIMNYFNLIQNFVSN----PDGRSEYE--------------------GFQKVQNGG CONSENSUS/80% .p.hhhh...p.ht+NLlps....ps.tth...........................tth CONSENSUS/65% aphhahh...p.htRNLl+N...ssuppshp....................th..spssu CONSENSUS/50% WptaYhh...sshpRNLl+N...Psu--uhp....................tWphspsGG 5911.XP_001020270_from_279_to_458DGITIQKSEK---------------DCNFITSYGW--------------CTLKWSKSLKE CONSENSUS/80% stWphpp.....h..h.........p..hhsshth..............shhtphlsL.. CONSENSUS/65% csWphEp.....t.shs......tsppsFsoSath..............ChKpQhlDL.. CONSENSUS/50% DGWclEcs.h..spsaPp....sslppsFlTSash..............CpKpQllDL.. 5911.XP_001020270_from_279_to_458IFSDKSKYNLELLIGKIQSGNYAIVAGAQICETGFGGEA--SLKIEILGED-ENVLFQ-- CONSENSUS/80% .tcGh...hhD.hpspIhlpphhtsp.......tsss.Y..ph.lpLhstp.tt.ltp.. CONSENSUS/65% .tEGh..tllDphpPcIplp-Wass+t......sssshY..plpVpLLstp.pphlsp.. CONSENSUS/50% psEGhhs-LLDshpPcIplSDWYusRp......DsGstY..cLpVcLLssc.csllsp.. 5911.XP_001020270_from_279_to_458---------------------FKRDIKDLT---REYKFYN---L-KYIHSWPDKVP--HK CONSENSUS/80% .....................ap...h......phtpt.....h.phpahFpsa..GlRa CONSENSUS/65% .....................apst.h.h....phsstt....WpplsHsFpsYssGVRa CONSENSUS/50% .....................Fpssslshp...Qascss....WpcVoHlFssYGPGVRa 5911.XP_001020270_from_279_to_458INFYISGKDTCFWAGHYGAKFKSITVKIIP- CONSENSUS/80% l.h.Htsps.pahtuhau.chssusl.l... CONSENSUS/65% lpFtHtGpDspaasGaYGs+losSoVplp.. CONSENSUS/50% lpFpHuG+DopFWuGaYGsRVTsSSVplps.
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |