Q9LXJ7/304-382 ECLLSH--LETFVW-IRY------------------------------DWEREEEKEVAT CONSENSUS/80% psl.tp..lchhph..t.................................t..tphchhp CONSENSUS/65% pCLhos..lchlch.pta...............................tsptpEhchsp CONSENSUS/50% cCLlSo..LEslcI.ppa...............................pGspcEhcll+ Q9LXJ7/304-382 YILRNAR----WL-KKGTISTNPIES---KDLEKLEE---RRKMLNELD-SVVR-ASNSC CONSENSUS/80% ahLtp......hL.cphtl.ht.....................hhtpl...h.p.hSsps CONSENSUS/65% ahLcshs....pL.cphplthpst.p...pp...........phhpcLh.ths+.tSspC CONSENSUS/50% YFLcNus....sL.Kclslphsssps...cp..........pclhp-Lt.plsR.sSosC Q9LXJ7/304-382 N--LVFE CONSENSUS/80% p..l.h. CONSENSUS/65% p..l.hh CONSENSUS/50% p..ltlt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |