TENA_CHICK/1-2 PYPKDCSQALL--NGEVTSGLYTIYLNGDR-TQPLQVFCDMAEDGGGWIVFLRRQ-NGKE CONSENSUS/80% ...tsCtphht.......sthhhlh..t......hpVaC-hpspsGGWhlhQpR..sGph CONSENSUS/65% .hscDCt-lhp...G.t.SGhahIh.sss..pp.hpVaCDMcosGGGWTVhQ+Rh.DGos CONSENSUS/50% spP+DCs-lhpp..GtpsSGlYpIpPsss..scslpVaCDM-T-GGGWTVlQRRh.DGSl TENA_CHICK/1-2 DFYR-NWKNYVAGFGDPK------------DEFWIGLENLHKISSQGQ--YELRVDLR-D CONSENSUS/80% sF.R.sWtpYttGFGp.t............sEaWLG.-tla.Lotpt...h.L+l-hp.h CONSENSUS/65% sFhR.sWppYcpGFGshs............sEaWLGN-plHtLTsptp..hpLRl-Lpsh CONSENSUS/50% DFaR.sWc-Y+cGFGsls............GEFWLGNEsIHpLTspsp..YcLRlDLcDa TENA_CHICK/1-2 RGETAYAVYDKFSVGD--------AKTRYRLRVDGYS-GTAGD--------------SMT CONSENSUS/80% tspthhA.YtpFhl.s........ttp.YtL.lssht.GsAus...............ht CONSENSUS/65% pssptaApYspFplss........ptptYcLhluuYs.GsAGc..............shs CONSENSUS/50% cGsssaAcYccFclus........-pssY+LpluuYs.GTAGDt.............uho TENA_CHICK/1-2 YHNGRSFSTFDKDNDSAITN-----CALSYKGA-FWYKN-CHRVNLMGRYG--------- CONSENSUS/80% .pts..FSThDpDpD.h..t.....Cu...tuu.WWapp.Ct.sNLNGhah......... CONSENSUS/65% hHssh.FSThDcDNDth.ss.....CA..hpGu.WWaps.CpsuNLNGhYh......... CONSENSUS/50% hHsGppFSTaD+DNDsssss.....CApptsGG.WWYss.CHsuNLNGpYY.s....... TENA_CHICK/1-2 ---DNNHSQGVNWFHWKGH--------EYSIQFAEMKLRPS CONSENSUS/80% ......h.pGl.W..hpu..........hShp.spMhl+.h CONSENSUS/65% ...p.thpsGlsWhta+G.........haSlchspMKlRPh CONSENSUS/50% ...spspssGIsWtsWKGp........pYSlKpocMKIRPt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |