28985.Q6CX48_from_106_to_184TEMSSDFDFQGNLQRFNKKDAFKDF----------------------------------- CONSENSUS/80% ...pt-FDFpts.t.Fp+pth.tph................................... CONSENSUS/65% .p.psDFDFpss.upFsKpplhpch................................... CONSENSUS/50% tphssDFDFEusNA+FcKcclhc-h................................... 28985.Q6CX48_from_106_to_184----------QNVEIPKDETKIPHNEM----------------VTAGNVKETTSDSDKIT CONSENSUS/80% ................................................t..hYp.ppshh CONSENSUS/65% ...........ttp....t.t..tttt................t.tttstthYsppcshh CONSENSUS/50% ..........tpssptstpsph.spsp.............tttpssssssssYc+scoFF 28985.Q6CX48_from_106_to_184ESINI-----------------------------------------------THLLRNDS CONSENSUS/80% -s.ss.. ..p.hp...................................htpp.t.sh CONSENSUS/65% Dslos.. ..pstpptt................................htcppphsh CONSENSUS/50% DslSs.. ..-spccssspttt..........................phs-c+chNs 28985.Q6CX48_from_106_to_184IAASLAN CONSENSUS/80% pphG... CONSENSUS/65% -TaG.ss CONSENSUS/50% ETFGpsu
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |