45351.JGI213159_from_221_to_319DENGNSIV-------IGCCNRGLIFY------------------EGKPDGEPGKLLSE-- CONSENSUS/80% pppt.ph........luls..Gl.la....................pst.p......... CONSENSUS/65% sppssplh.......LGlsstGlhla....................psphp.th...... CONSENSUS/50% ccsusclh.......LGlsspGlhlY..................t.pspp+hsp...... 45351.JGI213159_from_221_to_319---------FEWHEVIGARQHEQK------------------------------------ CONSENSUS/80% .........a.W.pl.pltaptpp.................................... CONSENSUS/65% .........F.Wscltplsapc+p.................................... CONSENSUS/50% .........FsWscIp+loF+cK+.................................... 45351.JGI213159_from_221_to_319------------LHILSLNNKEKVG----------------------------------- CONSENSUS/80% ............h.lt............................................ CONSENSUS/65% ............Fhlphps......................................... CONSENSUS/50% ............FtIclpsp........................................ 45351.JGI213159_from_221_to_319------EKLTFYFHGVFGHTSAKRVL------------KDLIAH--------QRL-FDQS CONSENSUS/80% ...........h.a.h.s.phs+hlh............phthtp........Hth.ah.. CONSENSUS/65% .........pphhFhhsshptsKhlh............chshpp........HpF.ahhh CONSENSUS/50% ......tptpslsFpssstcssKpLa............+hCl-p........HsF.appp 45351.JGI213159_from_221_to_319ENLVG CONSENSUS/80% p.... CONSENSUS/65% p.tts CONSENSUS/50% cssps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |