335543.Sfum_2659_from_237_to_387IVEVIDELYGNTEWRKSYPV---------ALLTLGQNHGPRFGAYREDR----------- CONSENSUS/80% shthhtphlt........................hhthsh.....t.............. CONSENSUS/65% Ahphhtchlst..tt...............h.thhhthshshhhtst............. CONSENSUS/50% AhchYpchLustspp...............hsshhtsaPlslptssp............. 335543.Sfum_2659_from_237_to_387-----------------YVNRLITGVLPDGRGVNI------------------------- CONSENSUS/80% .................hhhpt.hthp..ttsl.h......................... CONSENSUS/65% .................hhlRshhths..ssulsh......................... CONSENSUS/50% .................ahlRsllulcstsGulsh......................... 335543.Sfum_2659_from_237_to_387---------FEPDFECGSEIQFMLRDSGKMIKSARKNSSGLMRHITEEAGR--------- CONSENSUS/80% ............hstl..G....hh.tp.tthhtthtthhtth.t............... CONSENSUS/65% ............hssltpGt.hhhhhtstpshhpshpphhpphtpph............. CONSENSUS/50% ............usslcpGsplplptscssshlssscpshpphppphs............ 335543.Sfum_2659_from_237_to_387-----------------------KPLFGLYIDCA-----GRSGGCSN-TASEEAAEVQDV CONSENSUS/80% ..........................hhhhhsCh.....hRt..h.t....t....h... CONSENSUS/65% .......................tsthslhhsCh.....uRthhhhp...tpththhtth CONSENSUS/50% .......................pssuulhasCl.....GRthslts.thp-phtshpph 335543.Sfum_2659_from_237_to_387F------------NRYGVPLLGFYSGVEIAPL CONSENSUS/80% ..................shhGh.shGE.h.. CONSENSUS/65% ................thshhGFhshGEls.h CONSENSUS/50% h..............sssPlsGFaoaGEIuss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |