222929.C5PFR3_from_342_to_454HERARQIALYLLCWGEANQVRFMPECLCFIFKC-----------------ADDYLRSPEC CONSENSUS/80% pt.hh.luLaLLhWGEAsplRFhPEClCaIa+p.................h.th..t... CONSENSUS/65% ppplh.luLYLLIWGEAsNlRFhPECLCaIF+p.................h.shh.ss.s CONSENSUS/50% pcclhplALYLLIWGEAuNlRFMPECLCFIFHs.............Mh.pspchlpusss 222929.C5PFR3_from_342_to_454QNRVEPVPEF-------------------------------TYLNEIVTPLYQYCRDQGY CONSENSUS/80% .........................................saLppllpPlYphhttph. CONSENSUS/65% tpsht.h..................................sFLspllsPlYphlpppsh CONSENSUS/50% sssspsh..s...............................uFLcpVITPlYchl+s-st 222929.C5PFR3_from_342_to_454EIL-------DGKYVRRERDHNKII---GYDDINQLFWYPEGIERIILEDK CONSENSUS/80% ............t..ttptsHpthh...sYDDhNphFW..psh.plhh..t CONSENSUS/65% ............p.hptptsHsphh...sYDDlNphFWt.csh.clhhs.p CONSENSUS/50% ............pspsucpcHSsh+...NYDDlNEaFWsscslp+LsaPhc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |