O00546/1-115 QCVDIPADLRLCHNVG--YKKMVLPNLLEHETMA--EVKQQ---ASSWVPLLNKN-CHAG CONSENSUS/80% .C...shph.hC.shs..Ys.hhhPNhhtHps.t..pst.p...httahsLhpht.Cpst CONSENSUS/65% pC..pPlslshCpsls..YNhThhPNLltHpspt..-At.p...lppahPLlphp.Cpss CONSENSUS/50% sC..pPlslslCpsls..YNtTphPNLLsHsoQs..EAutc...lssFtPLlpss.CSP- O00546/1-115 TQVFLCSLFAPVCLDRP-----IYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKC--DKFP CONSENSUS/80% hphFLCshahPhC........sh.PC+thC.tspt.Ct.lht.hth.WP-.lpC..schP CONSENSUS/65% lphFLCulasPhCt.th....sl.PCRplCcps+ptCtslhptashtWP-.LcC..s+FP CONSENSUS/50% L+hFLCSlYAPlCscph...psIhPCRslCEul+ssCpPlMcpFGasWPEpLcC..s+FP O00546/1-115 EG-----DVCIAMTP CONSENSUS/80% .......thCht.s. CONSENSUS/65% .......phChs.sp CONSENSUS/50% sptt...clChssss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |