FAB1_YEAST/1-6 LSKEYWMKDESSKEC--FSC-GKTFNT-----------FRRKHHCRICGQIFCS----SC CONSENSUS/80% ..t..W..s...t.C....C.tt.Fsh...........hpR+HHCRtCGtlhCt....tC CONSENSUS/65% tptspWhs-...ppC...tC.pppFsh...........hpR+HHCRpCGplhCp....pC CONSENSUS/50% pssscWhcDp.sspC..hsC.cssFsh...........hsR+HHCRsCGclaCs....sC FAB1_YEAST/1-6 TLLIDGDRFGCHA-------------------KMRVCYNCYEHADT CONSENSUS/80% stt.h.h...t......................h+lCp.Chp.h.t CONSENSUS/65% sppph.hs..t......................hRVCcsCapphpt CONSENSUS/50% Sscpsslsptspt...................slRVCcsCasplsp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |