66692.ABC0889_from_2_to_115PEMPEMATYQKWLTRT---------VVGQMITDVEVNREKSINVPV------VEFKAAVQ CONSENSUS/80% PEhPEVchhtptlt.h.........h.t..h.t...h....ht...............h. CONSENSUS/65% PELPEVEsspcsLp.h.........h.sthlhp.hhht..tl+hs.......t...thh. CONSENSUS/50% PELPEVEsl+RuLpst.........lhGppIpphtllpssslRhshs.....p.htphlt 66692.ABC0889_from_2_to_115HQIVTE-VSRRGKQLLFHLANG-------------------------------------- CONSENSUS/80% sphl.t.htp+uKalhh.h......................................... CONSENSUS/65% Gpplts.lpRRGKaLlhpht........................................ CONSENSUS/50% Gpplps.lpRRGKYLllchst....................................... 66692.ABC0889_from_2_to_115-------------------------HMLLLHLMLGGWMYWGTEEDA-------------- CONSENSUS/80% ..........................hlh.HLtMpGphhh.................... CONSENSUS/65% ..........................hllhHLtMsGphplh................... CONSENSUS/50% .........................hsLllHLGMoGphpltsttt............... 66692.ABC0889_from_2_to_115----------------------------------------------------PDR--TKQ CONSENSUS/80% .........................................................p.p CONSENSUS/65% .......................................................ttHs+ CONSENSUS/50% ......................................................sp+HsH 66692.ABC0889_from_2_to_115VILSFSRH----------------KLYFIGLR-LGYIH CONSENSUS/80% h.h.htst.................hhh.D.Rphuhh. CONSENSUS/65% lphhhsss.................lpasDsRcFGthh CONSENSUS/50% lclplssu................pL+asDsR+FGshp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |