5061.CADANGAP00006871_from_762_to_1041QHGE--QLRAIDRQLKE----------TSADHERRSLQ-VKKHHEAEV------------ CONSENSUS/80% pE+t..phptLNs+hAs.al-+V+.....LEptNt.Lc.tphp.h.ppt........... CONSENSUS/65% pEKp..phpsLNsRhAu.al-KVR.....LEppNphLE.sclp.htpppsstst...... CONSENSUS/50% sEK-..plQsLNDRLAS.YI-KVR....pLEppNppLE.sKlcplpppcssssst..... 5061.CADANGAP00006871_from_762_to_1041-----ADLQKK--IRSL--ESDLK-----RGKEQSSAEIADLKTTIQLLKSEAEKTK--- CONSENSUS/80% .....t.hhpt..lppL..ptpl.t....ht.pptph..hphpp.hp..hcph+.+.... CONSENSUS/65% .....pthapp..lppL..+pplpp....hph-pspl..hphcs.hp.ts--a+hK.... CONSENSUS/50% .....sshacs..Ic-L..Rpplcs....hss-pu+lp.l-l-N.hctss-DF+sK.... 5061.CADANGAP00006871_from_762_to_1041---GQHV-AEVL-----DLNSTL--QNLQS---ALDADKGQHAAELSD-----LNA--TI CONSENSUS/80% ..h-pEh.th+t.....thEsph....h+c....h-th.htp..pLc..phpsLpp..-l CONSENSUS/65% ..aEpEh.shRp.....ssEs-h...sl++...slDphths+.s-LEt.pl-uLp-..El CONSENSUS/50% ..YEsEl.shRp.....slEs-l..ssL+K...slD-ssls+.s-LEs.clEuLp-..El 5061.CADANGAP00006871_from_762_to_1041QRLQ------------SELETGKGQH--------ATEV-------------SGLNKTI-- CONSENSUS/80% .hhcp.app.....-htthptphttt.........lphps..........t.shsthh.. CONSENSUS/65% taL+p.a-c.....ElppLpsplssss.......slphDs........s.s.DLspll.. CONSENSUS/50% sFLK+sHEE.....ElppLpsQlusssh......sV-hDs........spshDLssll.. 5061.CADANGAP00006871_from_762_to_1041EEL-KSQ-MDS------IQGKH--ESE---------------------VSD--LNKTIQK CONSENSUS/80% tch.+tp.Y-t......hstpshtphcthap................phtp..hp.thtt CONSENSUS/65% t-l.+sp.YEp......lup+spt-sEthap...............tphpp..lpppssp CONSENSUS/50% s-l.RuQ.YEs......lAp+N+pEAEsWap...............sKh--..Lpppssp 5061.CADANGAP00006871_from_762_to_1041LQS----ELDASSGQSAAEVSDLK---KTIETLQ-SEL---------------------- CONSENSUS/80% ptp....tlptsptp....lt-hp...p.lpthp.h-l...................... CONSENSUS/65% psc....plpss+pE....ls-hp...+plQpLp.hEl...................... CONSENSUS/50% ps-....sLcss+sE....lsEL+...RslQsLc.tEl...................... 5061.CADANGAP00006871_from_762_to_1041-------DSSN----------EQNATEVSDL--KKTIESLQSELENGKGDQAAE------ CONSENSUS/80% .......ps.h..............t.pttL..cttlt-hctpht.thtphpt....... CONSENSUS/65% .......puhp..............s.ptsL..Esslt-sEpchphplpphpsp...... CONSENSUS/50% .......-ul+..............up+suL..EssLs-sEp+astpLpshQsp...... 5061.CADANGAP00006871_from_762_to_1041---VSSLQETIKTFQS-DMDAARKQHETEVAELKSASKALQSELDTT------------- CONSENSUS/80% ...ltplEttltph+t.phtp..p-Yp.....LhshKhtL-hEIssY...+pLL....-u CONSENSUS/65% ...lspLEtpLpph+t.-htpphpEYpp....LlslKhtL-hEIATY...R+LL....EG CONSENSUS/50% ...lspLEspLpps+s.-hs+Ql+EYQc....LLslKhuL-hEIATY...R+LL....EG 5061.CADANGAP00006871_from_762_to_1041-KEK CONSENSUS/80% -p.p CONSENSUS/65% E-sc CONSENSUS/50% EEsR
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |