1148.sll0550_from_424_to_573IGRISGGLYIITAQKGE------------VKGAMLASWVSQASFNP----PGFTVAVAKD CONSENSUS/80% hthhstslsllos..................shhssuhss.lohpP... shlhhshttt CONSENSUS/65% hsphssuVsllTsts...............hGhsssuaso.lShpP... Phlhhslspp CONSENSUS/50% huphssGVslVTops.t............hhGhTssSasS.VSh-P... Pllllsls+s 1148.sll0550_from_424_to_573RAIESLMQV----GDRFVLNILEEGNYQILMKH-------FLKR---------------- CONSENSUS/80% t....hhtt....tt.hslslLsttp.th...h.......u................... CONSENSUS/65% stshshhpp....sspFslNlLstpptphstth.......uttt................ CONSENSUS/50% usotshlps....sscFsVNlLuscQpcluppF.......uspss............... 1148.sll0550_from_424_to_573-----------FPPGADRFAGVKTQT-ASN----GSPILTD--ALAYLECEVASRMECS- CONSENSUS/80% .................t.t...h............Phltt..shs.hpCph.t.hths. CONSENSUS/65% ................t+atththt.t.......tsPllts..uhuhh-CclhpthphG. CONSENSUS/50% ................s+Fssssaststt.....usPlLss..AlAtl-Cclpsph-sG. 1148.sll0550_from_424_to_573--------------DHWIVYSQVTNGRVAKAEG---LTAVHHRKVGNYY CONSENSUS/80% ..............sH.lhhupl.tht...........shhhhttthh. CONSENSUS/65% ..............sHhlhlucVhphphtp........sLhahptthtt CONSENSUS/50% ..............DHslllGcVhsschspt......tsLlaapspaps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |