28985.Q6CSM1_from_41_to_195NGYPCLDFSYHAQNTRTMRYDIVVEQVNWVKDNIYTVTVHVTGEEQIPLKS-----LWSL CONSENSUS/80% s.s..hph..p.t.tth..hsh.lpssphltsshYplTlphpsptth.ht......l.tL CONSENSUS/65% stssthshhhphtsssh.thshpVpsVpaltsNhYpVTlphpuppshtLpp.....lpsL CONSENSUS/50% suCsstsattptpssshPsuslsVosVsWVp-NsYcVTlcapucsslsLpp.....LpuL 28985.Q6CSM1_from_41_to_195KIIGIDSPDGSTIQLYGYNENTFLIDNPT--DWTATFRVYGQTDS-NDQSIVWMPTFEVQ CONSENSUS/80% plhshs....tsh.lhshst....lsss...passsh.l.ut......t..sh.sshpl. CONSENSUS/65% plhGhss..ssshhlhutssthh.lssPs..caouohpV.uppp....sshsh.ssFpIp CONSENSUS/50% KllGlsustsushlLautNspshhIDNPo..DaTATFpVpupsst..sssplhhPsFpIp 28985.Q6CSM1_from_41_to_195YEYCQGSRTDCSN-WKY-GTKNFDLITGCNNYDNNHRSQTDAPSY CONSENSUS/80% hcapps..sphtt.....hspphph.hsp...ttt....p..... CONSENSUS/65% a-aspss.sshsp..t..hspsashhhusss.ssts.stpphssh CONSENSUS/50% a-aspusss-hsshhph.hsssa-htsGCsshDsps.upossssa
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |