339671.Asuc_1884_from_5_to_117IFIEGLTVFAQIGVYDWEQQIKQPLVFDLEMTWDSRKAAET----------DNVANCLNY CONSENSUS/80% lhlpthth.shhGlht.Ep..tQ.hhlshth.h..................DplttslsY CONSENSUS/65% lhlcslphhshhGlhs.E+thtQphhlDlpl.h..h.tst...........DslppslsY CONSENSUS/50% IhlcsLclhuhlGVacaE+plsQclllDlcl.hsshpsAsp.........sD-lscolcY 339671.Asuc_1884_from_5_to_117AEVSDFVVSYVQSKP----FLLIERVAN---EVAEQLRQKFN-------ISWLRLKLSKP CONSENSUS/80% t.lhphl.thhtt......htLlEplst...plhphlhtp.........h..hplplpK. CONSENSUS/65% stlhptltphlppt.....hpLlEslAp...plsphlhpp.........lptlplplpKs CONSENSUS/50% uplscplpphlppp.....apLlEsLA-...clActlhsca.......tlptlcVclcKP 339671.Asuc_1884_from_5_to_117KAVSQARN--------------VGIIIER CONSENSUS/80% .s.h.s................hslthtp CONSENSUS/65% tssh.s................lulplpR CONSENSUS/50% sAslsu................VuVplcR
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |