561229.Dd1591_0181_from_1_to_106MNDSEFHQLADTLMLKIEETLDQFD-------------------------GDADIDYET- CONSENSUS/80% hs.tpatphspthhttltp.h-t.............................hDl-h... CONSENSUS/65% hspscappls-phlpplpctl-ph..........................tshDl-h... CONSENSUS/50% hs-s-Fcplu-psLcslc-plEcht-p.......................sssDlDh... 561229.Dd1591_0181_from_1_to_106NGGVMTLSF-ENG--SKIVINRQEPMH-QVWLAAK---------------------SGGY CONSENSUS/80% ssslhplph..sh..uphllN+Q.P.p.plWluu......................sGsh CONSENSUS/65% ssuVlolph.sst..uphlIN+QtP.+.QIWLuo......................SGsh CONSENSUS/50% uuGVLTlsF.sss..uphVINKQsPs+.QIWLASs.....................SGua 561229.Dd1591_0181_from_1_to_106HFDY----------------QNNRWICDRS-----------GSDFMTLLAQACSEQ--SG CONSENSUS/80% +apa.................tspWh.t+s...........stphhthLpp.ht.....t CONSENSUS/65% +aca.................sspWlsp+s...........upplhphLpcthspt...s CONSENSUS/50% HF-a................psucWlssRs...........GscLhslLscElupp..sG 561229.Dd1591_0181_from_1_to_106EEIHFD CONSENSUS/80% ..h.h. CONSENSUS/65% t.lpht CONSENSUS/50% pslsas
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |