44689.DDBDRAFT_0204534_from_266_to_392STW------------SNNLVP----QPNENITIPAGK--RVLISPC----SISQTAIYQR CONSENSUS/80% tsW................h.....t.st.lhl..s....hlls.s.........s.hp. CONSENSUS/65% psW.............ssshP....psuspVhI.tGp..hlllDss........sshhph CONSENSUS/50% soW.............ssslP....ssGcsVlIssGp..plLLDss........sssLsp 44689.DDBDRAFT_0204534_from_266_to_392IVIPATSELIFADSN----------------LTMNVKDILV-----QGKFIMG---TTKC CONSENSUS/80% lhl...GtL.h.ptt................h.lpsp.Ihl....ttGth.hG...t.tp CONSENSUS/65% lhl...GpLhFsssp................lsLpsphIll....puGpLhlG...opps CONSENSUS/50% LlIp..GsLlFs-ss................lsLcAcpIll....sGGcLplG...oEcs 44689.DDBDRAFT_0204534_from_266_to_392RYNA--NINIIFHGSKTKVDTIAP----FYGSK---------GIAVSAG----------- CONSENSUS/80% .apt..ph.IhLhGt...tsph........GtK.........hlulh............. CONSENSUS/65% Paps..phpIhLtGp..pssphsh.....hGsK.........sluVh............. CONSENSUS/50% Papu..pusIsLaGsp.pos-hsh.....hGuK.........sluVhp............ 44689.DDBDRAFT_0204534_from_266_to_392GFISVHG-------KQYHNSWTKLAS CONSENSUS/80% GtlplaG...........hsaTpLst CONSENSUS/65% Gsl-lHG.........hphsWTcLup CONSENSUS/50% GoL-LHG.......tppsloWT+Lus
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |