PHYE_ARATH DIGALCDTVVEDVQR-------LTGYDRVMVYQFHE------------------------ CONSENSUS/80% phtthhtthht.ltt.......hhthphshlhhhpt........................ CONSENSUS/65% shpphhpphhptlpp.......hhthcpshlhhhsp........................ CONSENSUS/50% clcsllpsllpplpp.......hLss-+sslhlhcp........................ PHYE_ARATH ----------DDHGEVVSEIRRSDLEP---------YLGLHYPATDIP---QAARFLFKQ CONSENSUS/80% ...............h..h...t.................th.........sh.t.hhtt CONSENSUS/65% ...........ttsthhhhhhpt.t.............thphshs......shsttlhpp CONSENSUS/50% ...........ppsplsstssssts............tttchsssp.....ulssplhps PHYE_ARATH N--RVRMIC-DCNATP-------VKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSV CONSENSUS/80% t....h.h..ph.tt....................h.......................h CONSENSUS/65% t..tshhls.chtps.............hhthhttht.....................ht CONSENSUS/50% s..pslsls.Dssscs...........pttsttsphp.....................sp PHYE_ARATH ASLALAIVVKGKD-------------SSKLWGLVVGHHC--------------------- CONSENSUS/80% shlshPlh.t.................tphhGhl.h.p...................... CONSENSUS/65% uhlslPlhst.................pphhGhlthhpp..................... CONSENSUS/50% uhLslPlhss.................scllGlLslpps..................... PHYE_ARATH --------SPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKK CONSENSUS/80% ................h..tp.phhp.hst.huhtlt...h.t..p CONSENSUS/65% ............tsptappp-.phhptlup.luhslpptphhpphp CONSENSUS/50% ...........tpscsascp-tclLptlAspluhulppsplhpphp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |