Consensus terms for the GAGE domain

30611.ENSOGAP00000013792_from_1_to_113MTGRARAR---ARGRARGQETVQHVGA----AASQ-QPGY-SQPRPQQPPAEGELVGRGR
CONSENSUS/80%    MohphRsp...sp.Rt...pssp.hts.....h....ss..tp.ptpEPPspsp-.hPsp
CONSENSUS/65%    MSh+sRop..ps+tRtp..cssp.lus....hh...pPos.cpsppcEPPTcsQDhsPuQ
CONSENSUS/50%    MSt+lRSc..+uRsR+sspcosphVGP....llsp.pPS-.EpPQpEEPPTESQDlsPuQ


30611.ENSOGAP00000013792_from_1_to_113QRGGTVGATAKSQELQISAGFQ--ELSLAERGGRRRDFHDLGVNTRQNLDHVKE------
CONSENSUS/80%    -tc..psss..hQs.t.cut.Q..Ehs..pstscttDGsDlpt.hhsp.-.h+h......
CONSENSUS/65%    E+E.scGAst.hQGPchEAs.Q..ELs.sKTssEpGDGPDVptphLPshE.hKh......
CONSENSUS/50%    E+E.sEGAPs.sQGP-LEA-hQ..ELupsKTGsEsGDGPDVKGcsLPNlEPlKM......


30611.ENSOGAP00000013792_from_1_to_113-SK-TGSSGIIV
CONSENSUS/80%    .sE.tu....p.
CONSENSUS/65%    .PE.uG..pspl
CONSENSUS/50%    .PE.AG-upsQl

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T