410358.Mlab_0316_from_328_to_417ATVCKYIVPM---------------DYPDK-PHA-GDVI--------------------T CONSENSUS/80% hshsVVhAut...............GYPts..tp.G..Ith................... CONSENSUS/65% sulsVVhAut...............GYPss..p+.Gp.Ipsh.................. CONSENSUS/50% sAlsVVlAup...............GYPss.YcK.GssIsGl.................t 410358.Mlab_0316_from_328_to_417VGPAENTIL-----------YYANIALENGV----------------------------- CONSENSUS/80% ....ts.hl...........aaAGst.ptst............................. CONSENSUS/65% .tt.tshhl...........FHAGTthpsst............................. CONSENSUS/50% tsssssspV...........FHAGTstccss............................. 410358.Mlab_0316_from_328_to_417--------LMTLT--SRTMAYVGIG--ASLAEAEKYAEAA--CRNVSGNV-----RYRSD CONSENSUS/80% ........lhssG..GRVLsssuhu..tsltpA.ttuYth..httlph.sh....haRpD CONSENSUS/65% ........llosG..GRVLslsuhG..sslppApppAYps..lpplpapsh....aaRcD CONSENSUS/50% ........lVTuG..GRVLsVoAlG..colp-Apc+AYcu..lcpIcacGt....aYR+D 410358.Mlab_0316_from_328_to_417IG----TEAL CONSENSUS/80% Iu....hpsh CONSENSUS/65% IG....h+ul CONSENSUS/50% IG....t+Al
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |