257309.DIP2130_from_971_to_1233AVHVLLPVFPGTNSEYDMAEAFEAA------GATTE--FHIIRNLNSEMLAADTEAFITK CONSENSUS/80% h.+hsllh..GsNsch-hhhuhp.s......Ghps.....lahpph.............. CONSENSUS/65% h.+sullth.GoNs-h-httAhctu......Ghpsh....Vahs-h.............. CONSENSUS/50% ps+lAVlpaPGoNsDtDsAtAhccA......Gh-sp...hVahsDttt........h..t 257309.DIP2130_from_971_to_1233LQSANILAFSGGFSLGDEPDGSAKFMAAFLRSD------TVAAAIKDFVA-------RDG CONSENSUS/80% ltthphlhhsGGFSaGDhLtsuthhths............hhpth.thhtp.......st CONSENSUS/65% LpshcsllhsGGFSYGDhLtuGshhutu............lhppltpahpc.......ss CONSENSUS/50% LccaculllPGGFSYGDhLcuGuthAtohh.........sltcplpcFhs+.......Gs 257309.DIP2130_from_971_to_1233LVLGICNGFQALVKS---GFLPYG------------DPAKMSAESPT------------- CONSENSUS/80% .slGlCNGhQhhsph...sllPs..................................... CONSENSUS/65% hsLGlCNGhQlLsch...GLlPG..................................... CONSENSUS/50% hlLGICNGFQlLscl...GLLPGs......................t............. 257309.DIP2130_from_971_to_1233--------LAHNRQLRHV--------SRIATTRVSS------VASPWLSTF--TPGQQHL CONSENSUS/80% ........hhhNtt.pa.........sc.s.lcl.p......s.s.ahpth....sphh. CONSENSUS/65% ........hhpNpst+F.........s+hshlclts......ssohahpsh...tGphl. CONSENSUS/50% ........Ls+Ncut+Fp........sRhlpl+Vps......osolFosuh...tGspls 257309.DIP2130_from_971_to_1233MPVSHGEGRFVV----SEKEAQALFSAGQVAFQYVDAEGTPTME-------APANPNGSN CONSENSUS/80% lsluHGEGph.h....t.t.htth.tpt.lshpYss..................NPNGS. CONSENSUS/65% lslAHGEGphhh....stpslpplpspsplsh+Ys-s.st.s...........hNPNGSh CONSENSUS/50% lPVAHGEG+ahs....sscsLccLcssspVshRYsDspGpsspt.......hshNPNGSs 257309.DIP2130_from_971_to_1233YAIEGIISPDGRILGKMGHPERFRDGLMR---------------------NIPGMEIQDI CONSENSUS/80% .sIsGlss.pGphhshMPHPERhhp.h.t......................sshht...h CONSENSUS/65% tsIAGlsstsGplhuhMPHPERshcsh.t.....................sssshp...l CONSENSUS/50% puIAGIssscGRVLGhMPHPERsscslpss....................sssGh+...l 257309.DIP2130_from_971_to_1233FANAVNYC CONSENSUS/80% Fpshhthh CONSENSUS/65% Fpshhphh CONSENSUS/50% Fcuulcal
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |