10116.ENSRNOP00000043286_from_24_to_102/1-79CAYFM-RQCLTDTD-GCK-----------------------------QSWRSME------ CONSENSUS/80% Chphh.p.Ct.s....Ct.............................phh.th....... CONSENSUS/65% Clpsh.ptCpts.h..Cp.............................pthtpah...... CONSENSUS/50% CLcut.csCpsDsp..Cc.............................sphssah...... 10116.ENSRNOP00000043286_from_24_to_102/1-79----------DACLVSGN------------------------------PGDSCKINNPLP CONSENSUS/80% ..........ttC..............................................t CONSENSUS/65% ..........ppCts.....................................t...t.tt CONSENSUS/50% ..........ssCsst.t...............................ts.p...stss 10116.ENSRNOP00000043286_from_24_to_102/1-79CNLSIQ-SL------VEKHFQFKG-----------------------CLCT------DDL CONSENSUS/80% C..tht ........th..p..h........................C.Ct.......p. CONSENSUS/65% Chpshp ........ttthpsha........................CsCp.....tpcp CONSENSUS/50% Ctpuhs ........spshsshas.....stt...h..h........CsCp..pt.ppcp 10116.ENSRNOP00000043286_from_24_to_102/1-79HCT-VNK--IFGKKC CONSENSUS/80% .C.thhh..hh...s CONSENSUS/65% tCtphht..hhts.C CONSENSUS/50% pCtphpc.phpsssC
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |