GELS_HUMAN/1-98 GQKQIWRIEGS--------NKVPVD-----PATYG------QFYGGDSYIILYNY----- CONSENSUS/80% ..h..hphpt.... ....h............s.......h.stcsall......... CONSENSUS/65% hthhhhphpst... ..t.h.h.......hsts......pLsssDsalLpts...... CONSENSUS/50% splplh+spsp... ..pslplsp....shspu......sLsosDsalL-ss...... GELS_HUMAN/1-98 ----------------RHGGRQGQIIYN--WQGAQSTQDEVAASAILTAQLDEEL----- CONSENSUS/80% .........................lah..W.Gttus..ctthuh.hs..h.tt..... CONSENSUS/65% .......................tplah..WhGppustpE+ttAhthupthhpp..... CONSENSUS/50% .......................splal..WlGppoopcE+psAtphApplpcpt.... GELS_HUMAN/1-98 -------------GGTPVQSRVV-QGK---------------EPAHLMSLFGGK CONSENSUS/80% .........h.h..h.put..... ....Es..Fhthhtsh CONSENSUS/65% .....h.t.splphh.pGp..... ....EsspFhphFtsh CONSENSUS/50% .....pssssplpll.-Gp..... ....EsspFhshFsut
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |