D908356 MYVLQSSLQ---WQAWHDTLTRLYNRGA--LFEKARP--LAKLCQTHQHP-FSVIQVDLD CONSENSUS/80% ...h.tplp.....s.hDslTtl.NRt...hh.p.h..tthtth.t.....hslhhhcl- CONSENSUS/65% hpthppplp.....uhhDsLTsL.NRp...hhpptlt.pthppttpttt..hullhlDlD CONSENSUS/50% ppptpcpLp...ptAppDsLTGLsNR+...hacppLp.pplppsppppp..hullllDlD D908356 HFKAINDRFGHQAGDRVLSHAAGLISSSLRA----QDVAGRVGGEEFCVILPGA------ CONSENSUS/80% th+.hN-thGa.hGD.hL.thsphltp.ht.....tshhsRhuG--Fhllh.t....... CONSENSUS/65% pFKtlNDpaGHthGDphLppluphLpphlcp....p-hluRhGG-EFslllsps...... CONSENSUS/50% pFKplNDsaGHssGDclLpplAppLpsslRs....sDlluRhGG-EFsllLsss...... D908356 SLTEAAEVAERIRLKLNEKEMLIA-KSTTIRISASLG-VSSS--------EETGDYDFEQ CONSENSUS/80% s.tth..hspplht.hpt.............hphohG.ls..............t.p.tp CONSENSUS/65% s.ppshtlspclhptlpp.hh.ts.....hhlshSlG.lsh...........ttstshpp CONSENSUS/50% sspcutslA-Rlppslspshhsps...hphtlolSlG.lush.........spsspsscp D908356 LQSLADRRLYLAKQA--------GRNRVFAS CONSENSUS/80% lhp.A-tshhtuKtt........stsph.hh CONSENSUS/65% lhppADpAhYpAKpp........G+sphhhh CONSENSUS/50% LlcpADpALYpAKps........GRNphshh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |