O42976/197-264 RDFH-RIFK---VLPPEDHLIDD------YGCALQR----------------DIFLHGRM CONSENSUS/80% ..hp.p.at....l..tEplhtt......h.s.h.p.................h.h.Gtl CONSENSUS/65% tpa+.phFp....lstpEplhss......atChL.p................th.htGpl CONSENSUS/50% ccF+.phFs....LsssEcLlss......YsCsLp+................plslpG+L O42976/197-264 YLSESHICFNSSIFGWVT------------------------------NIVIPVTEIVSV CONSENSUS/80% alop.hlhFhu.h.t..h..............................hh.h.h.tl.th CONSENSUS/65% alospplsFtS.h.tp.s..............................phslPhtplppl CONSENSUS/50% alSss+lsFpSphhsphs..............................plslPLscIspl O42976/197-264 EKKS CONSENSUS/80% pt.t CONSENSUS/65% p+.p CONSENSUS/50% cKhs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |