gi|1730211|sp|P AKKSRDIDYQLRKEEGSK---------------------NETKLLLLGPGESGKSTIFKQ CONSENSUS/80% .thsptIpp.lptpppt.t......................hKlLLLGsuESGKSTlhKQ CONSENSUS/65% tppsppI-cplcp-ppptp....................pplKlLLLGuGESGKSTllKQ CONSENSUS/50% pc+s+cI-+pLcc-+cspc....................pclKLLLLGAGESGKSTIlKQ gi|1730211|sp|P MKIIQDDGGFSID-ERLEYRYIIYGNCISQMKVLVTAAI-SQDLKPNNPD---------- CONSENSUS/80% h+lla.ts.astp.-h.tht.hlhtNhhpsht.llpsht.thth.ht............. CONSENSUS/65% M+IlHtsG.Fopc.Ehhpa+slIapNllpuhpsllcuhp.phplphpp..p......... CONSENSUS/50% M+IlHpsG.FSc-.Epcpa+slIasNllpuhcsLlcAhc.pLsIshcsspp......... gi|1730211|sp|P NETRFEKFSKIS---PGGNSWT-------------------------------------- CONSENSUS/80% ...phphhht........t..t...................................... CONSENSUS/65% ..tphphlhp.......ts.hp...................................... CONSENSUS/50% ..pcschlhph.....hscsscp..................................... gi|1730211|sp|P ------------------------------------------------------------ CONSENSUS/80% ...........................................................h CONSENSUS/65% ...........................................................h CONSENSUS/50% ..........................................................sh gi|1730211|sp|P -LEIAEDIKQLWS-DDSIQNIYRM-KDKFY---QLNDS---------------------- CONSENSUS/80% ..thht.hptLWt.s.slpthht..ctppa...tl.Ds...................... CONSENSUS/65% s.chhpslppLWp.Dsulppsap..+psca...pL.DS...................... CONSENSUS/50% st-lucslcpLWs.DsGlQpsac..RssEF...pLsDS...................... gi|1730211|sp|P ------AAYFFDNIGRFANENYVPTQDDVLRSRVRTTGIQEAHFKFINIEF--------- CONSENSUS/80% ......h.YahspltRltp.pYhPotpDlLhsRh.TpGl.-h.F.hpt..h......... CONSENSUS/65% ......stYFh-slsRlspssYlPoppDlL+sRhhToGIhEhpFphpphph......... CONSENSUS/50% ......ApYFLDNl-RIusssYlPT-QDIL+oRlpTTGIsEssFslcslsa......... gi|1730211|sp|P ----------RMLDVGGQRSERRKWIH----CFDS-VTAVIFCVALSEYDQTLREEESQ- CONSENSUS/80% ..........+hhDVGGQRspR+KWlp....hF-s.lsullFhsuhotYDphL.E-tp.. CONSENSUS/65% ..........+hhDVGGQRSER+KWIH....CF-s.VsullFlsulS-YDQsLhEDpss. CONSENSUS/50% ..........RhaDVGGQRSERKKWIH....CF-s.VTAIIFllALSEYDQsLhEDsss. gi|1730211|sp|P ---------------------------------NRMKESLMLFDEIVNSHWFRN-TAFII CONSENSUS/80% .................................NRhtEuh.lFpplhss.hF.p.sshlL CONSENSUS/65% .................................NRhpESlpLFcoIsNspaFtp.ouhIL CONSENSUS/50% .................................NRMpESLpLF-oIsNu+WFts.TSlIL gi|1730211|sp|P FFNKVDLFREKIAKI---DLGDYFPAYTGG---------------LSFDNSTQFIKKMFL CONSENSUS/80% FLNKhDlhtcKl.ts....hp.hFspapG................tshpts..ah.t.F. CONSENSUS/65% FLNKhDLFpEKlpps...slphhFP-YpGs...............pshpputpalpppFh CONSENSUS/50% FLNKhDLFcEKl++s...slsshFP-YcGs...............pchccAscaIcp+Fp gi|1730211|sp|P DLST---------------GNQRIFAHFTC-AIDTANIQFVFHAVRETLLKNIFNTIIN CONSENSUS/80% pht..................+.hY.HhTs.AsDTpplphlhtssh-hlhppslpthhh CONSENSUS/65% phsp................p+plYsHhTs.ATDTpplphVhsuVpDhIlppsLcphsl CONSENSUS/50% clNptp.............spKsIYsHhTC.ATDTsNI+hVFsuVpDsIlppNL+csGL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |