5518.FG07235.1_from_23_to_93ADLKL--RRLTELNNRLREDL-ERER--IPVST--ASKS--------------------- CONSENSUS/80% .t.....t.hpp.hp.Lp.ph.thpp..h.sSt..shtt..................... CONSENSUS/65% ppsh...pphcctlp.L+tcl.shpR..hpsSp..ssts..................... CONSENSUS/50% pssp...cpl++plcpL+pEl.shcR..lKVSc..usp-..................... 5518.FG07235.1_from_23_to_93IIAYCNGT--RDYMVPSVWGAVPKGE-------DPYAP-------------------QQS CONSENSUS/80% hhpahpp....Dshl....s.s..t........NPahp...................... CONSENSUS/65% lhpasppp.tpDPhl....s.s..p........NPahp...................... CONSENSUS/50% LlsYs-patppDPLL....usstss........NPats.....................c 5518.FG07235.1_from_23_to_93GGCCVVM CONSENSUS/80% p.thh.h CONSENSUS/65% pssphhh CONSENSUS/50% cssCslL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |