295358.mhp030_from_316_to_462NYWT-YLN-N---------SN----------P-----DNWSLSVKLFFSEI---VPIINK CONSENSUS/80% pha-.thh.t.........t......p....s.....p....sssalhspl....t.lpt CONSENSUS/65% caFE.tss.t.........st.....s....s.....+...hsusWlhs-l...hthLsp CONSENSUS/50% -aFE.ssl.p......t..us.....c....s.....K...tuANWlhuEL...hutLNc 295358.mhp030_from_316_to_462L------------G-----F-----------------EN---LAIEF-DFFGKIIQKHF- CONSENSUS/80% t............t..ht.l..................t.....lps.ttlstllthlt. CONSENSUS/65% p............s..hs.l.................tp...tslss.pplupllphlp. CONSENSUS/50% c............s..ls.l.................sp...ssloP.cpLAcLlcLIc. 295358.mhp030_from_316_to_462------------NKELSNSEI-RK-IIEIKQT----------NKQ--------------- CONSENSUS/80% ............psplotphu.+p.lht.hht......t...ttp............... CONSENSUS/65% ............sspIoschA.Kp.lhpthhp......s...sts............... CONSENSUS/50% ............cGsISuKlA.Kc.Vlcplhc......s...Gps............... 295358.mhp030_from_316_to_462FN-----LNDILSKI-K-EKKLS--EA--AIKNLLKEVV----SEEFAQ--IEKNRQ--- CONSENSUS/80% st.......tllpt..s.Lh.hs..-tt.tltthlppll....ttp.p...ltphpt... CONSENSUS/65% sp.......pllccp.G.Ltplo..Dps.tlptllccll....stNspt..lpca+s... CONSENSUS/50% Pc.......pIl-c+.G.LpQlo..Dsu.slcsll--Vl....usNscp..Vc-a+s... 295358.mhp030_from_316_to_462DKS-----KL-FKFLIGKLMQ-KTKGNA-EPIKVNQVLKEWL CONSENSUS/80% up......ph.hshhhGphM+.t.pGpA.sst.lppllhptl CONSENSUS/65% G+p.....+h.hshhlGplMK.to+G+A.sPphVsclLpccL CONSENSUS/50% GKc.....Ku.hGalVGQVMK.to+GKA.NPphVN-LL+c+L
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |