Consensus terms for the Gemini_AL1 domain 

REP_TPCTV/8-120  FQIAAKNYFLTYPNCSLSKEEALDQL......QRLQTPTNKKYIKVARELHEN.GEPHLH
CONSENSUS/80%    FphpupNhFLTYPpCslsKEEAhp.l......pclphs...KYIhlucEhHcs.Gp.HLH
CONSENSUS/65%    FphpupNhFLTYPpCslsKEEAhp.l......pclphs...KYIhlucEhHcs.Gp.HLH
CONSENSUS/50%    FplQAKNhFLTYPpCoLSKEEALsQI......Q+LQlsoNKKYIKlAREtH-D.GpPHLH


REP_TPCTV/8-120  VLIQFEGKFNCKNQRFFDLVSPTRST.............HFHPNIQ.....GAKSSSDVN
CONSENSUS/80%    sLlQhEtphphps.RhFDlsush+pt.............aFHPNIQ.....uAKSooDV+
CONSENSUS/65%    sLlQhEtphphps.RhFDlsush+pt.............aFHPNIQ.....uAKSooDV+
CONSENSUS/50%    VLlQhEGKFpsoNpRlFDLVSsTRSs.............HFHPNIQ.....GAKSSSDV+


REP_TPCTV/8-120  SYVDKDGDTI.EWGEFQID
CONSENSUS/80%    sYlcKDGssI.EhGpFp.c
CONSENSUS/65%    sYlcKDGssI.EhGpFp.c
CONSENSUS/50%    sYVDKDGDTI.EWGpFQlD

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T