369723.Strop_2568_from_75_to_1VTQHLAHLLAGPNE--AERAEGLATALPGAVTVAGVRLTGAR-----------AEVDVPP CONSENSUS/80% hp.hlp.Lhtss..........hh..hs.sspl.s....ts............hhlshst CONSENSUS/65% hpthlptLlpGPs.......sshhsshstssplhs..h.tss..........hshlshsp CONSENSUS/50% spsslcpLlsGPs.......sultsslPsuocLtshshpscu..........hspVDlSc 369723.Strop_2568_from_75_to_1VVD-GAGR----------SDEVFAFGQIVCTLTA-RPEVD---------AVSFLR---DG CONSENSUS/80% t.................t...hhhtplh.ohtt.h.tht.........tlph.l...pG CONSENSUS/65% phh..ths........ttttpthhltpllhTLsp.hsslp.........pVplhl...cG CONSENSUS/50% chh.tstst.......sssscphhlsulVhTLop.hsslc.........pVplpV...-G 369723.Strop_2568_from_75_to_1EPLGVPR CONSENSUS/80% p...... CONSENSUS/65% p.ht.ht CONSENSUS/50% cslsshs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |