208963.PA14_03880_from_114_to_ELSPRNILKRV----LKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGR------- CONSENSUS/80% .hssRthhpp............t...hhu.E.Eahlht...................... CONSENSUS/65% ttsPRthh++h....hhhttths.thhhGsEhEFalhpt.p................... CONSENSUS/50% sssPRslL++s..httttppuhuhpshsGsEhEFaLhcpsp.t................. 208963.PA14_03880_from_114_to_----------------------------------------------------SGRQETGR CONSENSUS/80% ...........................................................t CONSENSUS/65% ....................................................shhs.ttt CONSENSUS/50% ..................................................t.sspstsps 208963.PA14_03880_from_114_to_QSFSI----DAANEFDPLFEDMYDWCEAQG--LDLDTLIHEEGT---------------- CONSENSUS/80% .hash.......t.htthhpphh.hh.thG..h.hph.ptEss................. CONSENSUS/65% shash....tshsphpshhpchhpthtthG..h.lcstcpEsu................. CONSENSUS/50% saass....sshcpspclhc-lhpsLpphG..lslEspH+Elus................ 208963.PA14_03880_from_114_to_AQMEINFRHGD-------ALDLADQILVFKRTMREAALKHN-----------VAATFMAK CONSENSUS/80% uQhEhsh..ht.......shthuDph.hh+.hh+plA.phs...........hhsoFhsK CONSENSUS/65% GQhElsh.hhs.......slpsADphhhh+hhl+plApcaG...........htuoFMsK CONSENSUS/50% GQaEIsh.pts.......ulpsADplhhaKhll+plAc+aG...........lpATFMPK 208963.PA14_03880_from_114_to_PMTGE-------PGSAMHLHQSIVDV---------------------------------- CONSENSUS/80% Ph.t........sGsuhHhp.Slhp................................... CONSENSUS/65% Phhs........sGSGhHhHhSlhpt.................................. CONSENSUS/50% Phtut.......sGSGhHlHhSLhcst................................. 208963.PA14_03880_from_114_to_-----------------------------KTGKNIFSNA--------------------- CONSENSUS/80% .................................shh.s...................... CONSENSUS/65% ...............................tpshFhs.t.................... CONSENSUS/50% ...............................upNlFtcsst................... 208963.PA14_03880_from_114_to_-----------------DGTMSELFLHHIGGLQKF---IPEVLPLFAP---NVNSFRRFL CONSENSUS/80% .....................s..h..hluGlhtt...h.thhhhhss...thsua+Rhh CONSENSUS/65% ....................hSthhhhaluGllcp...h.slhshhsP...ssNSY+RLs CONSENSUS/50% ...................tLSchutpaIuGlL+H...usulsAlssP...olNSYKRLs 208963.PA14_03880_from_114_to_PDT--------SAPVNVEWGEENRTVGLRVPDSSPE-----------------------N CONSENSUS/80% s...........uss.hsauhtsRss.lRls............................. CONSENSUS/65% s........thtAPshhsauhpNRosslRlPhh..........................s CONSENSUS/50% s........uhpAPsslsWGtcNRoAulRlPtssss.......................u 208963.PA14_03880_from_114_to_RRVENRLAGADANPYLALAASLLCG CONSENSUS/80% tthE.R.sssssNPYlshushlhss CONSENSUS/65% tRlEhRhsssssNPYLshAuhltuG CONSENSUS/50% sRlEhRsPDusuNPYLAhAAlLsAG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |